diff --git a/erpnext/accounts/doctype/payment_entry/payment_entry.py b/erpnext/accounts/doctype/payment_entry/payment_entry.py
index b16b03e..38a5209 100644
--- a/erpnext/accounts/doctype/payment_entry/payment_entry.py
+++ b/erpnext/accounts/doctype/payment_entry/payment_entry.py
@@ -1152,8 +1152,25 @@
 					)
 
 				make_reverse_gl_entries(gl_entries=gl_entries, partial_cancel=True)
-			else:
-				make_gl_entries(gl_entries)
+				return
+
+			# same reference added to payment entry
+			for gl_entry in gl_entries.copy():
+				if frappe.db.exists(
+					"GL Entry",
+					{
+						"account": gl_entry.account,
+						"voucher_type": gl_entry.voucher_type,
+						"voucher_no": gl_entry.voucher_no,
+						"voucher_detail_no": gl_entry.voucher_detail_no,
+						"debit": gl_entry.debit,
+						"credit": gl_entry.credit,
+						"is_cancelled": 0,
+					},
+				):
+					gl_entries.remove(gl_entry)
+
+			make_gl_entries(gl_entries)
 
 	def make_invoice_liability_entry(self, gl_entries, invoice):
 		args_dict = {
diff --git a/erpnext/stock/report/stock_ledger_variance/__init__.py b/erpnext/stock/report/stock_ledger_variance/__init__.py
new file mode 100644
index 0000000..e69de29
--- /dev/null
+++ b/erpnext/stock/report/stock_ledger_variance/__init__.py
diff --git a/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.js b/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.js
new file mode 100644
index 0000000..b1e4a74
--- /dev/null
+++ b/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.js
@@ -0,0 +1,101 @@
+// Copyright (c) 2023, Frappe Technologies Pvt. Ltd. and contributors
+// For license information, please see license.txt
+
+const DIFFERENCE_FIELD_NAMES = [
+	"difference_in_qty",
+	"fifo_qty_diff",
+	"fifo_value_diff",
+	"fifo_valuation_diff",
+	"valuation_diff",
+	"fifo_difference_diff",
+	"diff_value_diff"
+];
+
+frappe.query_reports["Stock Ledger Variance"] = {
+	"filters": [
+		{
+			"fieldname": "item_code",
+			"fieldtype": "Link",
+			"label": "Item",
+			"options": "Item",
+			get_query: function() {
+				return {
+					filters: {is_stock_item: 1, has_serial_no: 0}
+				}
+			}
+		},
+		{
+			"fieldname": "warehouse",
+			"fieldtype": "Link",
+			"label": "Warehouse",
+			"options": "Warehouse",
+			get_query: function() {
+				return {
+					filters: {is_group: 0, disabled: 0}
+				}
+			}
+		},
+		{
+			"fieldname": "difference_in",
+			"fieldtype": "Select",
+			"label": "Difference In",
+			"options": [
+				"",
+				"Qty",
+				"Value",
+				"Valuation",
+			],
+		},
+		{
+			"fieldname": "include_disabled",
+			"fieldtype": "Check",
+			"label": "Include Disabled",
+		}
+	],
+
+	formatter (value, row, column, data, default_formatter) {
+		value = default_formatter(value, row, column, data);
+
+		if (DIFFERENCE_FIELD_NAMES.includes(column.fieldname) && Math.abs(data[column.fieldname]) > 0.001) {
+			value = "<span style='color:red'>" + value + "</span>";
+		}
+
+		return value;
+	},
+
+	get_datatable_options(options) {
+		return Object.assign(options, {
+			checkboxColumn: true,
+		});
+	},
+
+	onload(report) {
+		report.page.add_inner_button(__('Create Reposting Entries'), () => {
+			let message = `
+				<div>
+					<p>
+						Reposting Entries will change the value of
+						accounts Stock In Hand, and Stock Expenses
+						in the Trial Balance report and will also change
+						the Balance Value in the Stock Balance report.
+					</p>
+					<p>Are you sure you want to create Reposting Entries?</p>
+				</div>`;
+			let indexes = frappe.query_report.datatable.rowmanager.getCheckedRows();
+			let selected_rows = indexes.map(i => frappe.query_report.data[i]);
+
+			if (!selected_rows.length) {
+				frappe.throw(__("Please select rows to create Reposting Entries"));
+			}
+
+			frappe.confirm(__(message), () => {
+				frappe.call({
+					method: 'erpnext.stock.report.stock_ledger_invariant_check.stock_ledger_invariant_check.create_reposting_entries',
+					args: {
+						rows: selected_rows,
+					}
+				});
+			});
+		});
+	},
+};
diff --git a/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.json b/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.json
new file mode 100644
index 0000000..f36ed1b
--- /dev/null
+++ b/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.json
@@ -0,0 +1,22 @@
+{
+ "add_total_row": 0,
+ "columns": [],
+ "creation": "2023-09-20 10:44:19.414449",
+ "disabled": 0,
+ "docstatus": 0,
+ "doctype": "Report",
+ "filters": [],
+ "idx": 0,
+ "is_standard": "Yes",
+ "letterhead": null,
+ "modified": "2023-09-20 10:44:19.414449",
+ "modified_by": "Administrator",
+ "module": "Stock",
+ "name": "Stock Ledger Variance",
+ "owner": "Administrator",
+ "prepared_report": 0,
+ "ref_doctype": "Stock Ledger Entry",
+ "report_name": "Stock Ledger Variance",
+ "report_type": "Script Report",
+ "roles": []
+}
\ No newline at end of file
diff --git a/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.py b/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.py
new file mode 100644
index 0000000..732f108
--- /dev/null
+++ b/erpnext/stock/report/stock_ledger_variance/stock_ledger_variance.py
@@ -0,0 +1,279 @@
+# Copyright (c) 2023, Frappe Technologies Pvt. Ltd. and contributors
+# For license information, please see license.txt
+
+import frappe
+from frappe import _
+from frappe.utils import cint, flt
+
+from erpnext.stock.report.stock_ledger_invariant_check.stock_ledger_invariant_check import (
+	get_data as stock_ledger_invariant_check,
+)
+
+
+def execute(filters=None):
+	columns, data = [], []
+
+	filters = frappe._dict(filters or {})
+	columns = get_columns()
+	data = get_data(filters)
+
+	return columns, data
+
+
+def get_columns():
+	return [
+		{
+			"fieldname": "name",
+			"fieldtype": "Link",
+			"label": _("Stock Ledger Entry"),
+			"options": "Stock Ledger Entry",
+		},
+		{
+			"fieldname": "posting_date",
+			"fieldtype": "Data",
+			"label": _("Posting Date"),
+		},
+		{
+			"fieldname": "posting_time",
+			"fieldtype": "Data",
+			"label": _("Posting Time"),
+		},
+		{
+			"fieldname": "creation",
+			"fieldtype": "Data",
+			"label": _("Creation"),
+		},
+		{
+			"fieldname": "item_code",
+			"fieldtype": "Link",
+			"label": _("Item"),
+			"options": "Item",
+		},
+		{
+			"fieldname": "warehouse",
+			"fieldtype": "Link",
+			"label": _("Warehouse"),
+			"options": "Warehouse",
+		},
+		{
+			"fieldname": "voucher_type",
+			"fieldtype": "Link",
+			"label": _("Voucher Type"),
+			"options": "DocType",
+		},
+		{
+			"fieldname": "voucher_no",
+			"fieldtype": "Dynamic Link",
+			"label": _("Voucher No"),
+			"options": "voucher_type",
+		},
+		{
+			"fieldname": "batch_no",
+			"fieldtype": "Link",
+			"label": _("Batch"),
+			"options": "Batch",
+		},
+		{
+			"fieldname": "use_batchwise_valuation",
+			"fieldtype": "Check",
+			"label": _("Batchwise Valuation"),
+		},
+		{
+			"fieldname": "actual_qty",
+			"fieldtype": "Float",
+			"label": _("Qty Change"),
+		},
+		{
+			"fieldname": "incoming_rate",
+			"fieldtype": "Float",
+			"label": _("Incoming Rate"),
+		},
+		{
+			"fieldname": "consumption_rate",
+			"fieldtype": "Float",
+			"label": _("Consumption Rate"),
+		},
+		{
+			"fieldname": "qty_after_transaction",
+			"fieldtype": "Float",
+			"label": _("(A) Qty After Transaction"),
+		},
+		{
+			"fieldname": "expected_qty_after_transaction",
+			"fieldtype": "Float",
+			"label": _("(B) Expected Qty After Transaction"),
+		},
+		{
+			"fieldname": "difference_in_qty",
+			"fieldtype": "Float",
+			"label": _("A - B"),
+		},
+		{
+			"fieldname": "stock_queue",
+			"fieldtype": "Data",
+			"label": _("FIFO/LIFO Queue"),
+		},
+		{
+			"fieldname": "fifo_queue_qty",
+			"fieldtype": "Float",
+			"label": _("(C) Total Qty in Queue"),
+		},
+		{
+			"fieldname": "fifo_qty_diff",
+			"fieldtype": "Float",
+			"label": _("A - C"),
+		},
+		{
+			"fieldname": "stock_value",
+			"fieldtype": "Float",
+			"label": _("(D) Balance Stock Value"),
+		},
+		{
+			"fieldname": "fifo_stock_value",
+			"fieldtype": "Float",
+			"label": _("(E) Balance Stock Value in Queue"),
+		},
+		{
+			"fieldname": "fifo_value_diff",
+			"fieldtype": "Float",
+			"label": _("D - E"),
+		},
+		{
+			"fieldname": "stock_value_difference",
+			"fieldtype": "Float",
+			"label": _("(F) Change in Stock Value"),
+		},
+		{
+			"fieldname": "stock_value_from_diff",
+			"fieldtype": "Float",
+			"label": _("(G) Sum of Change in Stock Value"),
+		},
+		{
+			"fieldname": "diff_value_diff",
+			"fieldtype": "Float",
+			"label": _("G - D"),
+		},
+		{
+			"fieldname": "fifo_stock_diff",
+			"fieldtype": "Float",
+			"label": _("(H) Change in Stock Value (FIFO Queue)"),
+		},
+		{
+			"fieldname": "fifo_difference_diff",
+			"fieldtype": "Float",
+			"label": _("H - F"),
+		},
+		{
+			"fieldname": "valuation_rate",
+			"fieldtype": "Float",
+			"label": _("(I) Valuation Rate"),
+		},
+		{
+			"fieldname": "fifo_valuation_rate",
+			"fieldtype": "Float",
+			"label": _("(J) Valuation Rate as per FIFO"),
+		},
+		{
+			"fieldname": "fifo_valuation_diff",
+			"fieldtype": "Float",
+			"label": _("I - J"),
+		},
+		{
+			"fieldname": "balance_value_by_qty",
+			"fieldtype": "Float",
+			"label": _("(K) Valuation = Value (D) ÷ Qty (A)"),
+		},
+		{
+			"fieldname": "valuation_diff",
+			"fieldtype": "Float",
+			"label": _("I - K"),
+		},
+	]
+
+
+def get_data(filters=None):
+	filters = frappe._dict(filters or {})
+	item_warehouse_map = get_item_warehouse_combinations(filters)
+
+	data = []
+	if item_warehouse_map:
+		precision = cint(frappe.db.get_single_value("System Settings", "float_precision"))
+
+		for item_warehouse in item_warehouse_map:
+			report_data = stock_ledger_invariant_check(item_warehouse)
+
+			if not report_data:
+				continue
+
+			for row in report_data:
+				if has_difference(row, precision, filters.difference_in):
+					data.append(add_item_warehouse_details(row, item_warehouse))
+					break
+
+	return data
+
+
+def get_item_warehouse_combinations(filters: dict = None) -> dict:
+	filters = frappe._dict(filters or {})
+
+	bin = frappe.qb.DocType("Bin")
+	item = frappe.qb.DocType("Item")
+	warehouse = frappe.qb.DocType("Warehouse")
+
+	query = (
+		frappe.qb.from_(bin)
+		.inner_join(item)
+		.on(bin.item_code == item.name)
+		.inner_join(warehouse)
+		.on(bin.warehouse == warehouse.name)
+		.select(
+			bin.item_code,
+			bin.warehouse,
+		)
+		.where((item.is_stock_item == 1) & (item.has_serial_no == 0) & (warehouse.is_group == 0))
+	)
+
+	if filters.item_code:
+		query = query.where(item.name == filters.item_code)
+	if filters.warehouse:
+		query = query.where(warehouse.name == filters.warehouse)
+	if not filters.include_disabled:
+		query = query.where((item.disabled == 0) & (warehouse.disabled == 0))
+
+	return query.run(as_dict=1)
+
+
+def has_difference(row, precision, difference_in):
+	has_qty_difference = flt(row.difference_in_qty, precision) or flt(row.fifo_qty_diff, precision)
+	has_value_difference = (
+		flt(row.diff_value_diff, precision)
+		or flt(row.fifo_value_diff, precision)
+		or flt(row.fifo_difference_diff, precision)
+	)
+	has_valuation_difference = flt(row.valuation_diff, precision) or flt(
+		row.fifo_valuation_diff, precision
+	)
+
+	if difference_in == "Qty" and has_qty_difference:
+		return True
+	elif difference_in == "Value" and has_value_difference:
+		return True
+	elif difference_in == "Valuation" and has_valuation_difference:
+		return True
+	elif difference_in not in ["Qty", "Value", "Valuation"] and (
+		has_qty_difference or has_value_difference or has_valuation_difference
+	):
+		return True
+
+	return False
+
+
+def add_item_warehouse_details(row, item_warehouse):
+	row.update(
+		{
+			"item_code": item_warehouse.item_code,
+			"warehouse": item_warehouse.warehouse,
+		}
+	)
+
+	return row